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By No owner — last modified Aug 16, 2018 07:23 AM

 Galapagos - Formalities


Formalities requirements in the Galapagos can change on a daily basis. Noonsite endevours to post details of the latest known situation.

It is not permitted to anchor anywhere but in an official port. Following new regulations 2018 the following 3 options are possible for yachts wanting to visit the Galapagos:

1. EMERGENCY STOP - 72 hours

In the case of a real emergency such us mechanical, medical or other reasons (properly verified by the Maritime Authority) you will be allowed to stop in one of the 2 inhabited ports with repair facilities (Puerto Ayora and Puerto Baquerizo Moreno). It is only permitted to stop at Puerto Villamil if the other 2 inhabited ports cannot be reached.  

The length of stay is up to the Harbour Master's discretion. You will need to use an agent to complete the necessary paperwork. After the 3rd day you must pay all government fees.

Do not use this option as a free pass to "see the sights" as this will only cause problems and quite possibly bring stricter controls into play and prevent those from stopping in an emergency who really need to.

2. ONE PORT STOPOVER - Up to 7 days

This option is only allowed in Wreck Bay, Puerto Baquerizo. It is for yachts who wish to re-fuel, take on provisions, fresh water and possibly quick repairs.

Again, the length of stay is up to the Harbour Master's discretion (it could be up to 7 days). You will need to use an agent to complete the necessary paperwork and you must pay all government fees.

Obviously the disadvantage of this option is that you are not allowed to travel to other ports with your own boat.


  • A 20-day stopover with no Autografo is no longer possible.
  • The Galapagos does not recognise or allow the normal 72 hour breathing space to rest etc. before checking in. They allow 12 hours only, however in the first 12 hours you can take on provisions and water.



Yachts arriving with an Autografo in hand, are given up to 30 days with the possibility of a 30 day extension, and may be able to visit the following inhabited ports:

- Pto. B. Moreno, Isla San Cristobal (Wreck Bay)
- Pto. Ayora, Isla Santa Cruz (Academy Bay)
- Pto. Villamil, Isla Isabela
- Pto. Seymour, Isla Baltra
- Pto. Ibarra, Isla Floreana

Cruisers who have obtained an Autografo will automatically be issued a National Zarpe for the Galapagos.

As well as the Autografo, a number of documents and certificates are required in order to visit the Galapagos. For full details see Documents.


Ports of Entry

Boats must proceed directly to one of the official Ports of Entry: Puerto Ayora in Santa Cruz, or Puerto Baquerizo in San Cristobal. These are the only ports where boats may clear in.

Do your research carefully as to the best port of entry based on your requirements.

Isabela, Puerto Villamil, is not an official Port of Entry and there are hardly any services there (no fuel or ATM) and no Immigration official. It is however available for emergencies as indicated in point 1 above, and yachts with an Autografo can leave the country from Isabela, if they cover the expenses (approx. USD 100) of sending an immigration official there to stamp the Passports on departure.

Yachts arriving should not stop anywhere but a Port of Entry, nor must anyone go ashore in the national park without an official guide (except for a handful of sites where access without a guide is permitted - see Restrictions). Yachts may be boarded at any time to check if one has a guide. The penalty is a fine for stopping at outer islands without permission. All the local boats have guides on board who are in radio contact with the port authority and will immediately report any yacht breaking the regulations.


Under current law in all ports of Ecuador it is mandatory to use an agent to check in with the port captain for any stay of more than 1 day. That includes the Galapagos islands.

The agent acts as a go-between for your dealings with the port captain and he will collect the fees for your entry into the harbour.

Note: If wanting to organise an Autografo, then be sure to secure an agent at least 2 months prior to arrival, as it normally takes 6 weeks to process all paperwork. If not, it may still be beneficial to contact an agent in advance of your visit so that your details are in the system and you are aware of all costs. This is not mandatory but it is advisable to have previously arranged an agent. The Agent's fees vary. This fee is sometimes negotiable and it's up to you to decide which agent you take.

It is important to get a clear statement from the agent which charges his fee covers. See fees section for the various charges applicable in the Galapagos.

On completion of the clearing in procedure the agent must give you the original "factura", which is a receipt from the port captain detailing the fees charged. It should not be a photocopy.

Noonsite does not recommend any particular agent but there is a list of Clearance agents here. It can be useful to look at reports from cruisers for their various experiences.

Other Clearance Procedures

You will be boarded by a number of officials either all at once or at different times, and usually on the same day as each other - but sometimes not. Be patient - your agent will guide you through the procedure. Officials will include Galapagos National Park officials, an official from the Ministry of Environment, possibly a Doctor (at the HM's discretion) and an official from the Harbour Master. Expect anything from 6-10 officials in total.

It is possible the Navy will come on board to do an inspection, and check for foreign food, animals, guns and contraband.

Environmental Checks (GNP Inspection)

As of January 2014, all yacht arrivals will be subject to an Environmental Risk Assessment. These new rules give approval to conduct an interview with the captain on arrival and will include a hull inspection of the boat by a diver from the GNP. It is, therefore, advisable to have the hull thoroughly (perhaps professionally) cleaned prior to leaving your previous port and to even have a certificate showing it has been done, if possible. Also do your own hull inspection (if conditions allow) before arrival.

A certificate showing when the last coating of anti-fouling was applied may also be requested.

The cost of the  GNP inspection is borne by the visitor and is charged per person on board.  The ministerial approval also gives the GNP the authority to demand that if a yacht fails to meet their requirements (reasonable level of risk), they must leave the Galapagos Marine Reserve. If assessed (and it can take up to 3 days to know if you have passed or not), you may be required to exit the marine reserve (40 miles offshore), carry out remedial cleaning work on your hull and re-enter.

If moving between islands, be sure to check your hull before arriving in the next port as you may be inspected on arrival there as well (for example going from San Cristobal to Santa Cruz).

The black water system will be checked and a notice must be posted below saying " Do not discharge Black waters into the sea" (this must be near the engine room).

A second notice must be posted on the outside stating "Do not throw garbage overboard".

The fresh food on board may be inspected.

A Fumigation Certificate must be produced. See the Documents section below for details.

An AIS Certificate is required. Your tracking system must be switched on and active while you are in Galapagos waters.

Also to be carried on board:-

1) Absorbent towels, for fuel, in case of a spillage.

2) Biodegradable or Ecofriendly soap.

See Noonsite/Galapagos/Documents page below for further details.

Pre-Medical Inspection

You and your crew may be asked to have a medical inspection by a doctor (at the Harbour Master's discretion). Normally this happens if you have come from a country that is suffering an epidemic. There is a cost for this inspection.


The port captain will issue a domestic zarpe for the next port. The agent will handle the clearing out so let him know a couple of days before to be sure it all goes smoothly.

Always take time to look through the reports from cruisers - adjacent - to see the latest information we have received from those visiting the Galapagos.

Last updated:  July 2018


Passports must be valid for 6 months beyond your stay. You will need colour copies of the passports and ships papers. Take your crew with you.

Crew visas are country dependent.

Nationals of the following countries require a visa and should approach the Consulate of Ecuador of their residence (list may change without notice): Algeria, Bangladesh, Costa Rica, Cuba, El Salvador, Guatemala, India, Iran, Iraq, Jordan, Lebanon, Lybia, Nicaragua, Nigeria, North Korea, Pakistan, Palestine Authority, Panama, People's Republic of China, Sri Lanka, Syria, Tunisia and Vietnam.

Nationals of other countries do not require a visa for stays of up to 90 days or will be granted a T-3 card on arrival also valid for 90 days.

It is now a requirement that all visitors have health insurance cover.

See Fees for current immigration charges.

Crew leaving the vessel in the Galapagos do not have their passports stamped when the boat departs. The passport gets stamped when the crew leaves by plane. There is no other paperwork.

Last updated July 2018.


Firearms must be declared and will be sealed on board.

If ordering spare parts to be delivered to the Galapagos, expect long delays with Ecuador customs. Cruisers have reported waiting 3 weeks for an express delivery, claiming “yacht in transit” will save some duty costs, but will also slow the process further. Duty charges might run to 33% or more depending on the item.

See also the Restrictions section on this page.

Last updated March 2018.


Water Quality Issues
Despite recent improvements in infrastructure, there are still problems with the potable water system in the Galapagos Islands – specifically on San Cristobal. A recent study found that there were still contaminations (including E.Coli bacteria) in the potable water distribution systems.

It is strongly advised that you treat or boil all water that is intended for human consumption. Be careful eating fruits and vegetables that have been washed in potable water.


Your agent will list the documents required from you. These will include:-

Passport details, boat registration details, fumigation certificate, black water certification for the boat (can be a statement from the skipper regarding presence of holding tank).

Autografo or Cruising Permit

Those who wish to stop longer in the archipelago (longer than 20 days), and/or visit more than their Port of Entry on their own boat, must obtain an autographo (cruising permit). These can be obtained for between 1 and 5 ports and must be applied for through an agent.

The procedure for obtaining an autographo is lengthy (between 6 and 8 weeks) but can be done by email and fax and many cruisers say it was well worth the effort. Note that the authorities have a quota for yachts, of between four and six per month, although these quotas change from year to year. Therefore applications for autographos may not always be successful. Apparently large crews of more than four or five are not desired, as they are suspected of being on an unofficial charter. Any type of chartering by foreign yachts in the national park is not permitted.

Each Autographo is always an individual permit and itineraries are customised. Some agents for example, will "allow" Floreana as one of the 5 ports if applying for a 5 port autographo, others not. Also note that each port on the itinerary can only be visited once, it is not a permit to just cruise wherever you want.

On each island there are limited "free" sites where cruisers can visit without an official guide. However, if intending to explore the National Park in depth, an Official Naturalist Guide has to be hired at a fee of $200 per person per day, and has to be paid to the national park + all the administration fees. The process is long and expensive. There are about 40 places around the islands where tourists with guides may go ashore.

The regulations for pleasure craft are very specific:

  • According to Article 50 of the Special Law for the Conservation and Sustainable Development of the Galapagos province of 18 of March 1998, every foreign, non-commercial vessel in transit, with a maximum of 10 persons, can visit any one of the inhabited ports for up to a maximum of 20 days. To visit the National Park areas, they can leave their ship in any selected port and utilise the services of a local tourist operator. In such a case, each person is required to pay to the Galapagos National Park Service a park entrance fee of $US100 for every person older than 12 years and US$50 for children under 12. The Park entrance fee does not include the tariffs related to anchorage fees, which must be paid to the port captain, nor any payments required by the immigration authorities.

Those who do not intend to visit any of the National Park areas will be considered to be a vessel in transit. This comes under the international rules that permit the entry of vessels to international ports for a minimum time of 72 hours and therefore would not require additional procedures to enter Galapagos territorial waters.

  • Should an interested person wish to visit the National Park areas with their own vessel, they are subject to other regulations as follows:

    a) They must have the entry permit from the relevant naval organization to enter territorial waters. According to the stipulations of the article 138 of the Galapagos National Park Administrative Statute, vessels with a capacity of up to 30 persons must have the authorisation of the National Park Administration Office.

    b) On arrival at the islands, they must inform the port captain and pay the correspondent tariffs for lights, buoys and anchorage fee. Additionally they must complete immigration formalities.

    c) The visitor entry fee must be paid at the National Park office. They will receive an itinerary to the visitors sites within the park based on the availability due to site capacity standards.

    d) Additionally, every vessel that wishes to visit National Park areas under this system must contract the services of a licensed guide authorised by the National Park Service. This guide will sleep on board and accompany the shore party BUT as no dinghy may be left on the shore, one crew member will be required to remain with the yacht.

    e) According to article 142 of the mentioned statute, every vessel that comes to the Galapagos Islands must submit to quarantine inspections and present the fumigation certificate of the last port of call.

    f) Changes in the original crew entering Galapagos is not permitted except in the case of emergencies.

Fumigation, Sanitation and Garbage Documents

The Ministry of Environment official is interested in fumigation and sanitation. He will want to see a fumigation certificate and a sanitation certificate.

Fumigation Certificate

You must have a fumigation certificate from the last port. Certificates from Panama are accepted but it must confirm the following:

  • The vessel was fumigated against insects, rats, mosquitos, etc.
  • Method of fumigation
  • Used products
  • Quantity (dosage)
  • Date of fumigation
  • Date of expiry
  • It also must be valid during the whole stay in the Galapagos.

Your certificate may or may not be deemed sufficient. If not, your boat will have to be sprayed in the Galapagos for an additional charge. It does not appear to be a problem arriving without a fumigation certificate and getting it done in the Galapagos (cost approx. $80).
Be warned the fumigation smoke will leave an oily film over everything, so be sure to cover everything.

Sanitation Certificate

A sanitation certificate (black water holding tank confirmation) can be self-certified. This can be as simple as a statement from the skipper that the boat has a holding tank for sewage and black water. Make your own including details of your holding tanks then sign, date it and ideally boat stamp it. In addition, there must be posted below (near the engine compartment) a notice stating ' Do not discharge Black waters into the sea '

A certificate showing that the hull was professionally cleaned before leaving your previous port is also advisable.


Garbage needs to be divided into organic, recyclable or trash.

On the outside of the boat there must be a notice posted stating ' Do not throw garbage overboard'

Last updated March 2018.


Various fees need to be paid and do vary from port to port and agent to agent. The most expensive port appears to be Santa Cruz. All official expenses have to be paid in “cash” on the islands, paying with a credit card is not an option.

Break down of Clearance Fees
These are approximate, they do tend to vary a little depending on which agent you use:

Entry Fee for Private Yachts (NEW 2018): US$138.60 per vessel

Port Captain: US$10 x Gross Tonnage (estimated fee)

Immigration (Galapagos Migratory Card): US$20 per person
Immigration check in fee: US$15.60 per vessel
Immigration check out fee: US$15.60 per vessel

National Park Entrance Fee: US$100 per adult
National Park Entrance Fee: US$50 per child (under 12 years)
National Park Technical Hull Inspection: US$50 x no. of crew members

Biosecurity / Sanitary Inspection: US$100 per vessel
Biosecurity / Sanitary Inspection: US$200 (for larger vessels)

If you have an "Autografo" and sail from inhabited port to inhabited port, there are local arrival and departure fees.

Local Arrival Fee: US$10.75 
Local Departure Fee: US$10.75

Overtime Fees
Overtime must be paid outside office hours, 08:00-17:00 Monday to Friday, at weekends or during local holidays. The overtime fees are almost double the normal fee. Request that your agent complete clearance DURING office hours.

Agent Fees
The choice of which agent you use is entirely yours to make. The fees for the agent are not fixed.

For a one-port stop (including port captain and Immigration, taxis and copies of passports), US$200-250 is the normal asking price for an average size yacht.

Agent fees for an autographo are between $450 - $650.

It is not uncommon to get fees reduced if you negotiate. If the fees asked for are unacceptable you may ask for another agent. Ask for a clear breakdown of which fees your agent is including in his total cost.

National Park Cruising Fees
This is $200 per person, per day. You will hear this high dollar figure quoted occasionally. This daily fee DOES NOT apply to the average cruiser who is moving from island to island, anchoring in the major ports. It only applies to yachts who want to actually cruise the park areas outside the major ports.

These boats are also required to take on a licensed guide who will cost between $250 and $350 or more per day. The highest costs are charged for the more knowledgeable and private yacht experienced multi-lingual guides.

Fumigation Fee
A fumigation fee of $70 may be charged on boats that stay longer than 72 hours. If yachts arrive without a fumigation certificate, the fee to obtain one in the Galapagos is $4 per metre of the yacht's length.

Other Fees

Municipal fees are occasionally collected in the main ports and always collected from incoming passengers at one of the two airports.

Garbage disposal: US $30.

All fees quoted here are in US$ and are subject to change by the Ecuadorian government without notice.

Last updated:  July 2018


Environmental Risk Assessment

In January 2014, the Galapagos National Park received ministerial approval to make law its rules applying to the arrival of foreign boats in the Galapagos Marine Reserve. The changes give approval to conduct an interview with the captain on arrival to complete an environmental risk assessment of each boat.

The assessment of risk is now known to include an inspection of the hull of each boat with a diver from the GNP. The inspection could simply be a look from the surface, a snorkel of your hull or an actual dive with tanks – it seems to be luck of the draw. It is  advisable to have your hull thoroughly, perhaps professionally, cleaned before departing for the Galapagos and, if possible,  to have a certificate to show this has been done. To be extra sure, weather permitting, jump in and give the boat a final clean 50 miles offshore. Filming the cleaning and taking pictures will also provide proof that your boat is not a problem.

The cost of this is borne by the visitor and the fee is $50 per person on board.  The ministerial approval also gives the GNP the authority to demand that if a yacht fails to meet their requirements (reasonable level of risk), they must leave the Galapagos Marine Reserve. If assessed (and it can take up to 3 days to know if you have passed or not), you may be required to exit the marine reserve (40 miles offshore), at your own expense, carry out remedial cleaning work on your hull and re-enter.

Other Restrictions

Yachts are forbidden to anchor anywhere but in the official ports on each island and each of these places must be listed on your itinerary. Plan carefully as you may not be allowed to back-track.

NOTE: The National Park area and Marine Reserve extends 40 miles out from a line drawn between the outermost point of each island.

Map © National Geographic Society

Vessels arriving in Galapagos entering the protection zone established by law, i.e. 40 nautical miles from the baseline, are subject to regulations governing the transport of products that may endanger Galapagos.

Only waste for recycling can be left on the islands. This is not collected from boats (except in Puerto Ayora) and must be taken by taxi to the recycling centre and paid to be disposed of. All waste on board must be separated into organic, recyclable and trash.

In order to prepare your waste properly en-route to the Islands, read this article by the WWF on how to reduce your human footprint.

Lifejackets must be worn when using a dinghy.

The following sites are those that can be visited on your own without a day tour or certified Naturalist guide on the 3 main islands:

San Cristóbal
Playa Ochoa
Cerro tijeretas
Cerro chino
Laguna el junco

Santa Cruz
Media Luna (highlands - The tortoise reserve)
Las grietas
Tortuga bay
Los túneles

The wall of tears
Las tintoreras


It is illegal for foreigners ("extranjeros") to buy fuel at the Ecuadorian subsidised price. The International price for foreigners is approximately double this local price.

Agents can supply fuel; US$6 per gallon (2014), including US$1 for the agent organising delivery to your yacht via means of jerry cans (which he will supply).

Alternatively, the Capitania will issue a permit for you to independently go to a filling station with jerry cans. Including the cost of the water taxi and taxi to the filling station, this is still cheaper than using an agent, although considerably harder work.

Large fines have been levied or threatened for breaking these laws.

Note that the maximum amount of diesel supplied to each visiting yacht is 400 gallons (without additional paperwork). To apply for more than 400 gallons you must use an agent, who will submit the paperwork to the Navy.

It is necessary to have on board absorbent towels in case of a spillage of fuel.

Last updated March 2018.

(The Ecuadorian Service for plant and animal health in the Galapagos ) , Offices in all ports
Tel:(05) 527-023

Clearance Agents

Gala Yachts Services
Academy Bay and , San Cristobal, Wreck Bay , Galapagos
Tel:+ 593 999 11 6066 - 24/7 ,VHF Channel 16
Clearance, technical assistance, free internet at office, tours arranged etc. Contact: Antonio Moreano.
Galapagos Yacht Agency
6306 SW 23 St. Suite 100 , Miramar Fl 33023 , USA
Tel:Toll Free 1-800-426 0802 / Mobile: 305-332 3099 Fax:954-967 2547
Contact: Fernando Espinoza (head office USA - Puerto Ayora in Galapagos). Looking after yachts since 1990.
J C Soto
VHF Channel 67
Bolivar Pesantes' (Naugala) representative on Isabela.
Naugala - Galapagos Marine Company
St.Cristobal, Isabella, St.Cruz
Tel:0994205158 Fax:593-5-2520846
Operates on all islands. Contact: Bolivar Pesantes Palma. Limited in his English.
Rositas services
Tel:(593-5)520526/520106 ,VHF Channel 62
Operates from Wreck Bay. Contact: Gustavo Hernandez.
Sea Masters Group - Yacht Support for Galapagos
Tel:+(593) 999 11 6066
12 years of looking after superyachts - 2017 have begun to work with smaller cruising yachts.
Servigalapagos (Sail'n Galapagos) S.A.
Tel:+593 5 2526186 [24hrs] GSM: +593 [0] 9 9480859 ,VHF Channel 09
Contact: Ricardo Arenas. General Agency, fuel, permits, services authorized in all ports (Puerto Ayora, Puerto Baquerizo, Puerto Villamil and Baltra).
Yachtgala - Galapagos Yacht Services
Seymour Avenue and Fragata Street No. 363 , Puerto Ayora , Galapagos - Ecuador
Tel:+593 (0) 53 014 425 / Cell: +593 (0) 987 229 577 ,VHF Channel 07
Opening hours: 24/7
Contact: Javier Plúa Rizzo. Operates on all islands and inhabited ports.


Animals must be confined on board and are not to be taken ashore under any circumstances.

Should your pet be sick or die, please inform SESA-GALAPAGOS at once.

Last updated March 2017.

(The Ecuadorian Service for plant and animal health in the Galapagos ) , Offices in all ports
Tel:(05) 527-023
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Plans to Restore the Natural Integrity of the Galapagos Islands  (16 Aug 2009)

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Galapagos: Forget Cruising Permit for Small Yachts!  (16 Nov 2007)

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Galapagos Restrictions  (03 Nov 2006)